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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015793887.1_cds_XP_016435957.1_3102
CDS Infomation

[gene=LOC107762141] [db_xref=GeneID:107762141] [protein=aspartic proteinase-like protein 2] [protein_id=XP_016435957.1] [location=join(1722..2128,2234..2390,7630..7712,7809..7905,8174..8246,8344..8550,9349..9473,9632..9733,9813..9910,11480..11654)] [gbkey=CDS]
Sequence

ATGTCAAGCACATATCAACCTGTAAAATGTAATATTGACTGTACATGTGACAATGAGAGG
GAGCAATGCATTTACGAAAGACAGTATGCTGAGATGAGTTCTAGTAGCGGGGTGCTTGGA
GAGGACATTGTGTCCTTTGGAAACCAAAGTGAGCTTGCAACCCAGCGAGCTGTTTTTGGA
TGTGAAAATAGGGAAACTGGTGATCTTTACAGCCAACACGCTGATGGTATAATGGGCTTG
GGTCGTGGGGATCTCAGTATAGTGGATCAGCTTGTTGAGAAACATGTAATTAGTGATTCC
TTCTCTTTGTGTTATGGAGGGATGGACTTCGGTGGCGGTGCAATGGTTCTTGGTGGAATA
AAACCCCCTGAAGACATGGTCTTTACCAATTCGGATCCTGTACGCAGTCCATATTACAAT
ATTGAGCTGAAGGAGATACATGTTGCTGGGAAGGCACTGAATCTGAATCCACTGGTTTTT
GATGGAAATCATGGGACTGTGCTTGATAGTGGTACCACATATGCTTACCTTCCAGAAGCA
GCATTTGCAGCCTTCAAGAATGCAGTTATGAAAGCGGTTCATTCTCTAAAACAGATTGAA
GGGCCTGATCCAAATTATAAAGATATATGCTTTTCTGGTGCAGGAAGTGACATTTCACAA
CTCTCGAAAGCCTTTCCGCCTGTCGACATGGTATTTACAAATGGAAGGAAACTCTCTCTG
TCCCCTGAAAATTACTTGTTCCGGCATTCAAAGGTGCGTGGTGCTTATTGTCTGGGGATT
TTTCAGAATGGGAAGGATGCAACAACTCTTCTTGGAGGGATTATTGTCCGCAACACACTA
GTCACTTATGATCGTGAGCATGAAACGATCGGTTTCTGGAAAACCAACTGTTCCGAATTA
TGGGGCAGACTTAATTCATCTCCTCCACCTCCAGCATTGCCCTCTGGCTTGGATAACACA
AACTCCACAGGAAGTATGGCCCCTACACTGGTTCCTAGTGGATCTCCTGGGTATAATGCA
CCTGGGGAAATTATTGTTGGATTCATTACATTTTATATGTCATTGAGTATGAATTACTCG
GACTTGAAGCTTCGCATTACAGAGCTTACCCATCTCATTGCCCAAGAGTTGGGCGTTAAC
ATCGCACAGGTTCACTTAATGAACTTCTCAACAAAAGGAAATGATTCCCTTGTTAAATGG
GCTATCTTTCCAGCAGGATCTGCAAATTATATGTCAAATGCTGCTGCAACGGAAATAATA
CATCGGTTGGCTGAAACTCGAGTTCGTCTTCCTGATACATTTGGGAGTTACAGAATATTT
GAATGGGGCTTTGAACGCCTGCCAAAAAGGACTGGATGGCAGCAAAGTTACTTGATCGTT
GTTATAGCATTGTCAGTTGTGTTGATACTTGGATTATCAGCTTTCTTAGGATTGTTGATA
TGGAGACGGGGGCAAGAATCGCCTCTGCCATATGAACGTGTTGAGACCGTTGTGCGCGAA
CAAGAACTCCAACCACTAACGTGA

Peptide Sequence

PEP ID

XP_016435957.1
PEP Infomation

PREDICTED: aspartic proteinase-like protein 2 [Nicotiana tabacum]
Sequence

MSSTYQPVKCNIDCTCDNEREQCIYERQYAEMSSSSGVLGEDIVSFGNQSELATQRAVFG
CENRETGDLYSQHADGIMGLGRGDLSIVDQLVEKHVISDSFSLCYGGMDFGGGAMVLGGI
KPPEDMVFTNSDPVRSPYYNIELKEIHVAGKALNLNPLVFDGNHGTVLDSGTTYAYLPEA
AFAAFKNAVMKAVHSLKQIEGPDPNYKDICFSGAGSDISQLSKAFPPVDMVFTNGRKLSL
SPENYLFRHSKVRGAYCLGIFQNGKDATTLLGGIIVRNTLVTYDREHETIGFWKTNCSEL
WGRLNSSPPPPALPSGLDNTNSTGSMAPTLVPSGSPGYNAPGEIIVGFITFYMSLSMNYS
DLKLRITELTHLIAQELGVNIAQVHLMNFSTKGNDSLVKWAIFPAGSANYMSNAAATEII
HRLAETRVRLPDTFGSYRIFEWGFERLPKRTGWQQSYLIVVIALSVVLILGLSAFLGLLI
WRRGQESPLPYERVETVVREQELQPLT

Transcript Sequence

Gene sequence data has not been registered.